cc-mapping: Cell Cycle Mapping

cc-mapping provides Gaussian Mixture Model-based thresholding tools for cell cycle analysis.

Install

Learn how to install cc-mapping and get started.

Install cc-mapping

API Reference

Explore the detailed API documentation.

API Reference

Examples

See practical examples and tutorials.

Examples

Features

• Gaussian Mixture Model Thresholding: Automatically identify cell cycle phases using GMM-based methods

• Sequential Thresholding: Apply thresholding sequentially across multiple features

• Visualization Tools: Built-in plotting functions for quality control and results

• AnnData Integration: Works seamlessly with scanpy/AnnData workflows